38-Issue 3
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Browsing 38-Issue 3 by Subject "Computing methodologies"
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Item ClustMe: A Visual Quality Measure for Ranking Monochrome Scatterplots based on Cluster Patterns(The Eurographics Association and John Wiley & Sons Ltd., 2019) Abbas, Mostafa M.; Aupetit, Michaël; Sedlmair, Michael; Bensmail, Halima; Gleicher, Michael and Viola, Ivan and Leitte, HeikeWe propose ClustMe, a new visual quality measure to rank monochrome scatterplots based on cluster patterns. ClustMe is based on data collected from a human-subjects study, in which 34 participants judged synthetically generated cluster patterns in 1000 scatterplots. We generated these patterns by carefully varying the free parameters of a simple Gaussian Mixture Model with two components. and asked the participants to count the number of clusters they could see (1 or more than 1). Based on the results, we form ClustMe by selecting the model that best predicts these human judgments among 7 different state-of-the-art merging techniques (DEMP). To quantitatively evaluate ClustMe, we conducted a second study, in which 31 human subjects ranked 435 pairs of scatterplots of real and synthetic data in terms of cluster patterns complexity. We use this data to compare ClustMe's performance to 4 other state-of-the-art clustering measures, including the well-known Clumpiness scagnostics. We found that of all measures, ClustMe is in strongest agreement with the human rankings.Item A Framework for GPU-accelerated Exploration of Massive Time-varying Rectilinear Scalar Volumes(The Eurographics Association and John Wiley & Sons Ltd., 2019) Marton, Fabio; Agus, Marco; Gobbetti, Enrico; Gleicher, Michael and Viola, Ivan and Leitte, HeikeWe introduce a novel flexible approach to spatiotemporal exploration of rectilinear scalar volumes. Our out-of-core representation, based on per-frame levels of hierarchically tiled non-redundant 3D grids, efficiently supports spatiotemporal random access and streaming to the GPU in compressed formats. A novel low-bitrate codec able to store into fixed-size pages a variable-rate approximation based on sparse coding with learned dictionaries is exploited to meet stringent bandwidth constraint during time-critical operations, while a near-lossless representation is employed to support high-quality static frame rendering. A flexible high-speed GPU decoder and raycasting framework mixes and matches GPU kernels performing parallel object-space and image-space operations for seamless support, on fat and thin clients, of different exploration use cases, including animation and temporal browsing, dynamic exploration of single frames, and high-quality snapshots generated from near-lossless data. The quality and performance of our approach are demonstrated on large data sets with thousands of multi-billion-voxel frames.Item Robust Extraction and Simplification of 2D Symmetric Tensor Field Topology(The Eurographics Association and John Wiley & Sons Ltd., 2019) Jankowai, Jochen; Wang, Bei; Hotz, Ingrid; Gleicher, Michael and Viola, Ivan and Leitte, HeikeIn this work, we propose a controlled simplification strategy for degenerated points in symmetric 2D tensor fields that is based on the topological notion of robustness. Robustness measures the structural stability of the degenerate points with respect to variation in the underlying field. We consider an entire pipeline for generating a hierarchical set of degenerate points based on their robustness values. Such a pipeline includes the following steps: the stable extraction and classification of degenerate points using an edge labeling algorithm, the computation and assignment of robustness values to the degenerate points, and the construction of a simplification hierarchy. We also discuss the challenges that arise from the discretization and interpolation of real world data.Item Robust Reference Frame Extraction from Unsteady 2D Vector Fields with Convolutional Neural Networks(The Eurographics Association and John Wiley & Sons Ltd., 2019) Kim, Byungsoo; Günther, Tobias; Gleicher, Michael and Viola, Ivan and Leitte, HeikeRobust feature extraction is an integral part of scientific visualization. In unsteady vector field analysis, researchers recently directed their attention towards the computation of near-steady reference frames for vortex extraction, which is a numerically challenging endeavor. In this paper, we utilize a convolutional neural network to combine two steps of the visualization pipeline in an end-to-end manner: the filtering and the feature extraction. We use neural networks for the extraction of a steady reference frame for a given unsteady 2D vector field. By conditioning the neural network to noisy inputs and resampling artifacts, we obtain numerically stabler results than existing optimization-based approaches. Supervised deep learning typically requires a large amount of training data. Thus, our second contribution is the creation of a vector field benchmark data set, which is generally useful for any local deep learning-based feature extraction. Based on Vatistas velocity profile, we formulate a parametric vector field mixture model that we parameterize based on numerically-computed example vector fields in near-steady reference frames. Given the parametric model, we can efficiently synthesize thousands of vector fields that serve as input to our deep learning architecture. The proposed network is evaluated on an unseen numerical fluid flow simulation.Item Scalable Ray Tracing Using the Distributed FrameBuffer(The Eurographics Association and John Wiley & Sons Ltd., 2019) Usher, Will; Wald, Ingo; Amstutz, Jefferson; Günther, Johannes; Brownlee, Carson; Pascucci, Valerio; Gleicher, Michael and Viola, Ivan and Leitte, HeikeImage- and data-parallel rendering across multiple nodes on high-performance computing systems is widely used in visualization to provide higher frame rates, support large data sets, and render data in situ. Specifically for in situ visualization, reducing bottlenecks incurred by the visualization and compositing is of key concern to reduce the overall simulation runtime. Moreover, prior algorithms have been designed to support either image- or data-parallel rendering and impose restrictions on the data distribution, requiring different implementations for each configuration. In this paper, we introduce the Distributed FrameBuffer, an asynchronous image-processing framework for multi-node rendering. We demonstrate that our approach achieves performance superior to the state of the art for common use cases, while providing the flexibility to support a wide range of parallel rendering algorithms and data distributions. By building on this framework, we extend the open-source ray tracing library OSPRay with a data-distributed API, enabling its use in data-distributed and in situ visualization applications.Item A User-based Visual Analytics Workflow for Exploratory Model Analysis(The Eurographics Association and John Wiley & Sons Ltd., 2019) Cashman, Dylan; Humayoun, Shah Rukh; Heimerl, Florian; Park, Kendall; Das, Subhajit; Thompson, John; Saket, Bahador; Mosca, Abigail; Stasko, John; Endert, Alex; Gleicher, Michael; Chang, Remco; Gleicher, Michael and Viola, Ivan and Leitte, HeikeMany visual analytics systems allow users to interact with machine learning models towards the goals of data exploration and insight generation on a given dataset. However, in some situations, insights may be less important than the production of an accurate predictive model for future use. In that case, users are more interested in generating of diverse and robust predictive models, verifying their performance on holdout data, and selecting the most suitable model for their usage scenario. In this paper, we consider the concept of Exploratory Model Analysis (EMA), which is defined as the process of discovering and selecting relevant models that can be used to make predictions on a data source. We delineate the differences between EMA and the well-known term exploratory data analysis in terms of the desired outcome of the analytic process: insights into the data or a set of deployable models. The contributions of this work are a visual analytics system workflow for EMA, a user study, and two use cases validating the effectiveness of the workflow. We found that our system workflow enabled users to generate complex models, to assess them for various qualities, and to select the most relevant model for their task.Item Visual Analysis of Charge Flow Networks for Complex Morphologies(The Eurographics Association and John Wiley & Sons Ltd., 2019) Kottravel, Sathish; Falk, Martin; Bin Masood, Talha; linares, mathieu; Hotz, Ingrid; Gleicher, Michael and Viola, Ivan and Leitte, HeikeIn the field of organic electronics, understanding complex material morphologies and their role in efficient charge transport in solar cells is extremely important. Related processes are studied using the Ising model and Kinetic Monte Carlo simulations resulting in large ensembles of stochastic trajectories. Naive visualization of these trajectories, individually or as a whole, does not lead to new knowledge discovery through exploration. In this paper, we present novel visualization and exploration methods to analyze this complex dynamic data, which provide succinct and meaningful abstractions leading to scientific insights. We propose a morphology abstraction yielding a network composed of material pockets and the interfaces, which serves as backbone for the visualization of the charge diffusion. The trajectory network is created using a novel way of implicitly attracting the trajectories to the skeleton of the morphology relying on a relaxation process. Each individual trajectory is then represented as a connected sequence of nodes in the skeleton. The final network summarizes all of these sequences in a single aggregated network. We apply our method to three different morphologies and demonstrate its suitability for exploring this kind of data.